Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842915.1_cds_XP_016508539.1_21552
CDS Infomation

[gene=LOC107826104] [db_xref=GeneID:107826104] [protein=suppressor protein SRP40-like] [protein_id=XP_016508539.1] [location=join(152925..153197,154956..155020,155641..155681,155797..155987,156089..156457,156762..156851,156964..157025,157150..157255)] [gbkey=CDS]
Sequence

ATGCTAGAAACCAAAACCAGACAACAGCTGCAAAACCCTAGTACCTCCTCATCATCATCA
ACAGCAGCAGCAGCAGCAGCTGCTTGTTTATTAGCTTTCAAGCCTAGGCAGGTGCTTCTA
GCACAGTCCTCAAAGTCTAATCTTGTTATTATGGCTAAGAAGCAGCAGCCTCAAGAAAAC
AAATCTCTTTTACACCAATCTATTCTCCATTATCTTAACCTCAATGGCTTCTCCAAAACC
CTCAAATACTTCCTCAAAGAAACTCAAACTGAGAGTGACAGTTGGAAGTCTTGCTCCCAC
AGTTTGGGGGATATATTTTGCAAGTATCTAAACAACTGTACGAATAATGATACAGTCTCT
AAGGGCCACAGTGAGCCAGGGCCAGATGGCACAAATGGGAACAACATTGCTACCAATGCT
GCTGACTCTCTGGAAACAATTAGTAAGAAAAAGAAGAAAAAGAGAAGCGAAGACAAAAAT
GGCGATGTTCCAGATGCTTCTCTTCCTGAAAGTGTTGATAAATCGGCGAAAAATACTACA
ACAGCTCAAGAGGTTTTAGCAGATGATAAGGTGGACGTGCCCTTGAAGAAGAAGGAGAAG
AAAAAGAAGAAAACTAAGGAGCAATCAGACGGTGTAGTACCTATAGGCAATGATAATGAT
GATGTTACCGAGAGAACTAAAAAAGATAAAAAGAAGAAGTCCAAGGAAGAGAATGGTGCT
ACTGATTCTAAGGATTCCAAGAAGAGGAAAAGATCAGTTTCTGATGAAAATGCAAACGAG
GGAGTTGGAACTGAAGAATCAAAACGCAGAAAGACCGATGGCTTGGAAGATTCAAAGGCA
GAACAGAATGGTGAAGTCAGTGTTGGTAATCATCAGGATGAGTTGAACAATTCTGCTAAG
CAGAAATCATCGAGGAAAGAACTTAATGGATCAACAGAGCCAAAAACTGTAAATGCATTT
CAAAGAGTGAAAATCGAGCAAGTGCAGTTTAAAGATGATAGACTAAAAGATAACTCTTAT
TGGGCAAAGGATGGTGCAGAAATTGGCTATGGTGCAAAGGCACAGGAAGTCTTGGGTCAG
GTTAGAGGAAGGGATTTCCGACATGAGAAGACGAAGAAGAAGCGAGGTAGTTACAGAGGA
GGGCAAATCGACTTGCAATCACACTCGGTCAAGTTCAACTATTCTGATGAGGAGTAG

Peptide Sequence

PEP ID

XP_016508539.1
PEP Infomation

PREDICTED: suppressor protein SRP40-like [Nicotiana tabacum]
Sequence

MLETKTRQQLQNPSTSSSSSTAAAAAAACLLAFKPRQVLLAQSSKSNLVIMAKKQQPQEN
KSLLHQSILHYLNLNGFSKTLKYFLKETQTESDSWKSCSHSLGDIFCKYLNNCTNNDTVS
KGHSEPGPDGTNGNNIATNAADSLETISKKKKKKRSEDKNGDVPDASLPESVDKSAKNTT
TAQEVLADDKVDVPLKKKEKKKKKTKEQSDGVVPIGNDNDDVTERTKKDKKKKSKEENGA
TDSKDSKKRKRSVSDENANEGVGTEESKRRKTDGLEDSKAEQNGEVSVGNHQDELNNSAK
QKSSRKELNGSTEPKTVNAFQRVKIEQVQFKDDRLKDNSYWAKDGAEIGYGAKAQEVLGQ
VRGRDFRHEKTKKKRGSYRGGQIDLQSHSVKFNYSDEE

Transcript Sequence

Gene sequence data has not been registered.